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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
UCEC rs655623 chr5:176534516 A/G LOC388955 chr2:63849182-63850159:- 0.68 7.28 1.69E-11 Box Plot
UCEC rs6569497 chr6:127871976 C/T STXBP3 chr1:109289296-109352148:+ 0.47 7.17 3.07E-11 Box Plot
UCEC rs6569498 chr6:127875339 T/G STXBP3 chr1:109289296-109352148:+ 0.46 7.11 4.21E-11 Box Plot
UCEC rs6569499 chr6:127875367 A/G STXBP3 chr1:109289296-109352148:+ -0.47 -7.09 4.74E-11 Box Plot
UCEC rs6570253 chr6:138987304 G/A DCD chr12:55038375-55042277:- 0.88 6.91 1.23E-10 Box Plot
UCEC rs6570254 chr6:138987346 A/G DCD chr12:55038375-55042277:- 0.88 6.91 1.23E-10 Box Plot
UCEC rs6570256 chr6:138987631 G/A DCD chr12:55038375-55042277:- 0.88 6.91 1.23E-10 Box Plot
UCEC rs660439 chr11:49231060 A/G FOLH1B chr11:89372395-89431886:+ 0.57 7.37 9.94E-12 Box Plot
UCEC rs660476 chr11:49231026 C/T FOLH1B chr11:89372395-89431886:+ 0.57 7.21 2.4E-11 Box Plot
UCEC rs66680644 chr9:32293357 TACACAC/T MYF5 chr12:81110691-81113452:+ -0.58 -7.91 5.0E-13 Box Plot
UCEC rs670039 chr11:49242363 C/T FOLH1B chr11:89372395-89431886:+ 0.57 7.37 9.94E-12 Box Plot
UCEC rs67034375 chr6:26618721 ACGAGGTCAGGAGTT/A ZNF322B chr9:99957633-99961910:- 0.64 6.96 9.48E-11 Box Plot
UCEC rs67084135 chr9:113189687 G/A CD52 chr1:26644448-26647014:+ 0.71 6.92 1.17E-10 Box Plot
UCEC rs6870359 chr5:176710065 C/G LOC388955 chr2:63849182-63850159:- 0.76 7.14 3.58E-11 Box Plot
UCEC rs6920207 chr6:138987162 C/T DCD chr12:55038375-55042277:- 0.88 6.91 1.23E-10 Box Plot